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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PRP40 pre-mRNA processing factor 40 homolog A (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000152922  |
Prpf40a-003 |
ENSMUSG00000061136 |
10090 | - |
2:53172394-53191204  |
processed_transcript |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007E5 | CIL_0007E5_0002 | CGP | 2:52857860-53191284 |
| CIL_0007DS | CIL_0007DS_0002 | CGP | 2:53134704-53219220 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000354363
|
PRPF40A-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 337 |
|
ENST00000410080
|
PRPF40A-001 | protein_coding | Homo_sapiens | 0 | 412 |
|
ENST00000448428
|
PRPF40A-008 | protein_coding | Homo_sapiens | 0 | 337 |
|
ENST00000450303
|
PRPF40A-002 | retained_intron | Homo_sapiens | 0 | 335 |
|
ENST00000467114
|
PRPF40A-009 | retained_intron | Homo_sapiens | 0.000000000000003 | 86 |
|
ENST00000486100
|
PRPF40A-003 | processed_transcript | Homo_sapiens | 0 | 207 |
|
ENST00000489741
|
PRPF40A-006 | retained_intron | Homo_sapiens | 0 | 209 |
|
ENST00000493468
|
PRPF40A-016 | protein_coding | Homo_sapiens | 0 | 638 |
|
ENST00000545856
|
PRPF40A-004 | protein_coding | Homo_sapiens | 0 | 689 |
