C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: GC-rich sequence DNA binding factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152996 Gcfc2-002 ENSMUSG00000035125 10090 + 6:81923673-81959256 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderOvaryPlacentaTestisENSMUST00000152996
Transcript ID Bladder Ovary Placenta Testis
ENSMUST00000152996 1.346±0.00 2.085±0.43 1.067±0.00 0.725±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321027 GCFC2-001 protein_coding Homo_sapiens 0 331
ENST00000409857 GCFC2-004 protein_coding Homo_sapiens 0 193
ENST00000470503 GCFC2-003 protein_coding Homo_sapiens 0 261
ENST00000472230 GCFC2-005 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000541687 GCFC2-201 protein_coding Homo_sapiens 0 331

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