C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GC-rich sequence DNA-binding factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470503 GCFC2-003 ENSG00000005436 9606 - 2:75701796-75710899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000470503
Transcript ID Lung
ENST00000470503 3.340±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000245 IMP spliceosomal complex assembly
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0045892 NAS negative regulation of transcription, DNA-templated
GO:0071008 IDA U2-type post-mRNA release spliceosomal complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132301 Gcfc2-003 retained_intron Mus_musculus 0 261
ENSMUST00000152996 Gcfc2-002 nonsense_mediated_decay Mus_musculus 0 261
ENSMUST00000043195 Gcfc2-001 protein_coding Mus_musculus 0 261

Loading