C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras-like without CAAX 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153060 Rit2-001 ENSMUSG00000057455 10090 - 18:30974315-31317133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153060
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153060 0.346±0.28 1.047±0.42 0.104±0.02 10.949±3.35 0.024±0.00 0.758±0.40 0.060±0.00 0.314±0.15 0.007±0.00 0.031±0.00 0.016±0.00 0.012±0.00 0.009±0.01 0.060±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XU CIL_0006XU_0002 CGP 18:30272747-31317290
CIL_0003WU CIL_0003WU_0002 CGP 18:30973489-31447415

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326695 RIT2-001 protein_coding Homo_sapiens 0 907
ENST00000589109 RIT2-002 protein_coding Homo_sapiens 0 686
ENST00000590910 RIT2-003 protein_coding Homo_sapiens 0 398

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