C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras-like without CAAX 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000326695 RIT2-001 ENSG00000152214 9606 - 18:42743227-43115691 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryPlacentaTestisENST00000326695
Transcript ID Brain Colon Ovary Placenta Testis
ENST00000326695 7.001±0.83 0.211±0.00 0.067±0.00 0.140±0.01 0.163±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XU CIL_0006XU_0001 CGP 18:41955206-43115691
CIL_0003WU CIL_0003WU_0001 CGP 18:42743227-43277650

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 NAS:IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005886 TAS plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 TAS:IEA signal transduction
GO:0007264 NAS:IEA small GTPase mediated signal transduction
GO:0007268 TAS synaptic transmission
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0048011 TAS neurotrophin TRK receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153060 Rit2-001 protein_coding Mus_musculus 0 907
ENSMUST00000139924 Rit2-002 protein_coding Mus_musculus 0 442
ENSMUST00000082070 Rit2-003 nonsense_mediated_decay Mus_musculus 0 351

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