C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane protein 208
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153146 Tmem208-002 ENSMUSG00000014856 10090 + 8:105326362-105329055 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000153146
Transcript ID Brain
ENSMUST00000153146 7.935±1.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K1 CIL_0005K1_0002 CGP 8:105312341-105335219
CIL_0005K2 CIL_0005K2_0002 CGP 8:105326354-105347953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304800 TMEM208-001 protein_coding Homo_sapiens 0 669
ENST00000561586 TMEM208-006 retained_intron Homo_sapiens 0 462
ENST00000562235 TMEM208-002 nonsense_mediated_decay Homo_sapiens 0 785
ENST00000563168 TMEM208-003 retained_intron Homo_sapiens 0 237
ENST00000563271 TMEM208-009 retained_intron Homo_sapiens 0 202
ENST00000563426 TMEM208-008 processed_transcript Homo_sapiens 1.99993e-41 172
ENST00000563953 TMEM208-007 protein_coding Homo_sapiens 0 597
ENST00000564087 TMEM208-012 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000564649 TMEM208-010 retained_intron Homo_sapiens 0 346
ENST00000565201 TMEM208-011 protein_coding Homo_sapiens 0 414
ENST00000567193 TMEM208-005 retained_intron Homo_sapiens 0 488

Loading