C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: endonuclease V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153204 Endov-006 ENSMUSG00000039850 10090 + 11:119491374-119507691 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000153204
Transcript ID Brain
ENSMUST00000153204 8.394±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LC CIL_0002LC_0002 CGP 11:119393100-119511437
CIL_00042I CIL_00042I_0002 CGP 11:119491347-119547753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004519 IEA endonuclease activity
GO:0006281 IEA DNA repair
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323854 ENDOV-004 protein_coding Homo_sapiens 0 366
ENST00000517795 ENDOV-006 protein_coding Homo_sapiens 0 366
ENST00000518137 ENDOV-002 protein_coding Homo_sapiens 0 366
ENST00000518901 ENDOV-010 protein_coding Homo_sapiens 0 366
ENST00000518907 ENDOV-009 protein_coding Homo_sapiens 0 329
ENST00000519117 ENDOV-014 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000520136 ENDOV-017 protein_coding Homo_sapiens 0 215
ENST00000520284 ENDOV-008 protein_coding Homo_sapiens 0 329
ENST00000520367 ENDOV-001 protein_coding Homo_sapiens 0 366
ENST00000520484 ENDOV-012 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000522200 ENDOV-018 protein_coding Homo_sapiens 0 329
ENST00000522577 ENDOV-015 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000522751 ENDOV-005 protein_coding Homo_sapiens 0 366
ENST00000523828 ENDOV-020 protein_coding Homo_sapiens 0 231

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