C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00042I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173818-ENSG00000171246 CGP 9606 17:80415165-80477843
GeneTranscriptPositionBiotype
ENSG00000171246 (NPTX1)
neuronal pentraxin I
ENST00000306773 (NPTX1-001) 80467148-80476604 protein_coding
ENST00000535681 (NPTX1-002) 80467148-80474698 retained_intron
ENST00000571100 (NPTX1-005) 80471903-80475812 retained_intron
ENST00000575212 (NPTX1-004) 80473414-80477843 processed_transcript
ENSG00000260369 (CTD-2526A2.2)
ENST00000562672 (CTD-2526A2.2-001) 80453735-80454729 lincRNA
ENSG00000279273 (CTD-2526A2.4)
ENST00000624285 (CTD-2526A2.4-001) 80463451-80465593 TEC
CIL_00042I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039850-ENSMUSG00000025582 CGP 10090 11:119491347-119547753
GeneTranscriptPositionBiotype
ENSMUSG00000025582 (Nptx1)
neuronal pentraxin 1
ENSMUST00000026670 (Nptx1-001) 119538719-119547753 protein_coding
ENSMUSG00000039850 (Endov)
endonuclease V
ENSMUST00000064513 (Endov-011) 119499511-119505962 protein_coding
ENSMUST00000106244 (Endov-001) 119491347-119511423 protein_coding
ENSMUST00000106245 (Endov-003) 119491630-119511437 protein_coding
ENSMUST00000129327 (Endov-005) 119491389-119507751 protein_coding
ENSMUST00000132015 (Endov-009) 119501978-119507389 retained_intron
ENSMUST00000134873 (Endov-004) 119491785-119502827 processed_transcript
ENSMUST00000140323 (Endov-010) 119491426-119507379 protein_coding
ENSMUST00000143670 (Endov-008) 119491676-119500817 retained_intron
ENSMUST00000143817 (Endov-002) 119491375-119509579 nonsense_mediated_decay
ENSMUST00000153204 (Endov-006) 119491374-119507691 nonsense_mediated_decay
ENSMUST00000154370 (Endov-007) 119491551-119505121 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042I_0001ENSG00000171246ENST00000306773ENST00000535681ENST00000571100ENST00000575212ENSG00000260369ENST00000562672ENSG00000279273ENST00000624285CIL_00042I_0002ENSMUSG00000025582ENSMUST00000026670ENSMUSG00000039850ENSMUST00000064513ENSMUST00000106244ENSMUST00000106245ENSMUST00000129327ENSMUST00000132015ENSMUST00000134873ENSMUST00000140323ENSMUST00000143670ENSMUST00000143817ENSMUST00000153204ENSMUST00000154370
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042I_0001ENSG00000171246ENST00000306773ENST00000535681ENST00000571100ENSG00000260369ENST00000562672ENSG00000279273ENST00000624285CIL_00042I_0002ENSMUSG00000025582ENSMUST00000026670ENSMUSG00000039850ENSMUST00000064513ENSMUST00000106244ENSMUST00000106245ENSMUST00000129327ENSMUST00000140323ENSMUST00000143670ENSMUST00000143817ENSMUST00000153204
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171246 ENST00000306773 N/A 0.158±0.00 0.025±0.00 8.629±1.79 0.111±0.10 1.668±1.15 N/A 0.029±0.00 0.471±0.00 0.159±0.00 0.129±0.00 0.133±0.11 0.675±0.33 1.152±0.46
ENST00000535681 N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.113±0.00 N/A N/A
ENST00000571100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.738±0.00 N/A N/A N/A
ENST00000575212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260369 ENST00000562672 0.056±0.00 0.144±0.00 N/A 0.036±0.00 0.063±0.00 N/A N/A 0.268±0.24 N/A N/A 0.285±0.00 0.141±0.00 0.093±0.00 0.387±0.12
ENSG00000279273 ENST00000624285 0.019±0.00 0.020±0.00 N/A 0.160±0.00 N/A 0.020±0.00 0.068±0.00 N/A N/A 0.032±0.00 N/A 0.024±0.00 N/A 0.156±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025582 ENSMUST00000026670 0.879±0.80 0.918±0.10 0.912±0.04 16.054±16.93 0.082±0.02 0.394±0.08 0.050±0.02 0.039±0.02 0.037±0.04 4.433±1.69 0.023±0.02 1.467±0.59 0.229±0.08 0.075±0.04
ENSMUSG00000039850 ENSMUST00000064513 N/A N/A N/A N/A N/A N/A N/A N/A 1.292±0.20 N/A N/A N/A N/A N/A
ENSMUST00000106244 2.647±0.57 1.561±0.77 2.369±0.15 4.119±1.72 1.691±0.48 2.158±0.42 1.101±0.09 1.122±0.29 1.072±0.43 2.036±0.23 0.389±0.10 2.125±0.90 0.494±0.15 1.292±0.67
ENSMUST00000106245 1.162±0.69 1.370±0.55 2.936±0.77 5.677±0.32 1.815±0.43 2.170±0.38 0.322±0.00 1.155±0.56 0.737±0.00 2.228±0.63 0.380±0.00 2.832±1.22 0.582±0.00 1.060±0.70
ENSMUST00000129327 3.026±0.32 3.453±0.53 N/A N/A 3.388±0.00 5.707±2.08 N/A 2.148±0.35 1.921±0.43 N/A 1.000±0.08 6.675±1.30 1.204±0.17 2.456±0.00
ENSMUST00000132015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.481±0.00 9.452±0.00 1.998±0.15 1.455±0.00
ENSMUST00000143670 N/A N/A N/A N/A N/A N/A N/A N/A 3.135±0.00 N/A N/A N/A 1.597±0.00 N/A
ENSMUST00000143817 1.801±0.85 2.248±0.70 1.308±0.02 4.963±0.00 1.956±0.40 2.790±0.52 0.693±0.14 1.190±0.32 0.673±0.20 1.625±0.11 0.664±0.11 2.795±0.79 0.552±0.17 2.091±0.34
ENSMUST00000153204 N/A N/A N/A 8.394±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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