C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA 3110002H16 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153233 3110002H16Rik-008 ENSMUSG00000024410 10090 + 18:12185655-12189931 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WY CIL_0005WY_0002 CGP 18:12128850-12189997
CIL_0005WX CIL_0005WX_0002 CGP 18:12168717-12236400

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269221 C18orf8-001 protein_coding Homo_sapiens 0 444
ENST00000269228 NPC1-001 protein_coding Homo_sapiens 1e-23 117
ENST00000589215 C18orf8-003 nonsense_mediated_decay Homo_sapiens 0 217
ENST00000589409 C18orf8-010 retained_intron Homo_sapiens 0 374
ENST00000590868 C18orf8-004 protein_coding Homo_sapiens 0 444
ENST00000590870 C18orf8-002 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000591367 C18orf8-013 processed_transcript Homo_sapiens 0 444
ENST00000592682 C18orf8-011 retained_intron Homo_sapiens 0 250
ENST00000593081 C18orf8-012 retained_intron Homo_sapiens 0 444
ENST00000615148 C18orf8-201 protein_coding Homo_sapiens 0 217

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