C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tetraspanin 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000153336  |
Tspan5-005 |
ENSMUSG00000028152 |
10090 | + |
3:138742769-138894484  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008LO | CIL_0008LO_0002 | VISTA | 3:138442669-139045155 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000305798
|
TSPAN5-001 | protein_coding | Homo_sapiens | 0 | 455 |
|
ENST00000505184
|
TSPAN5-004 | protein_coding | Homo_sapiens | 0 | 453 |
|
ENST00000507167
|
TSPAN5-010 | retained_intron | Homo_sapiens | 0 | 268 |
|
ENST00000508798
|
TSPAN5-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 455 |
|
ENST00000509168
|
TSPAN5-007 | processed_transcript | Homo_sapiens | 0 | 455 |
|
ENST00000511651
|
TSPAN5-005 | protein_coding | Homo_sapiens | 0 | 436 |
|
ENST00000511753
|
TSPAN5-003 | retained_intron | Homo_sapiens | 7.00649e-45 | 187 |
|
ENST00000511800
|
TSPAN5-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 270 |
|
ENST00000515287
|
TSPAN5-006 | protein_coding | Homo_sapiens | 0 | 455 |
|
ENST00000515440
|
TSPAN5-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 268 |
