C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carboxypeptidase A6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479862 CPA6-002 ENSG00000165078 9606 - 8:67422125-67746343 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLungOvaryPlacentaENST00000479862
Transcript ID Adipose Breast Colon Kidney Lung Ovary Placenta
ENST00000479862 0.024±0.00 0.036±0.03 0.225±0.00 0.029±0.00 0.282±0.00 0.020±0.00 0.058±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BT CIL_0005BT_0002 CGP 8:67173512-67746345
CIL_0005BU CIL_0005BU_0002 CGP 8:67422125-68237030

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153695 Cpa6-002 nonsense_mediated_decay Mus_musculus 0 797
ENSMUST00000035577 Cpa6-001 protein_coding Mus_musculus 0 544
ENSMUST00000140938 Cpa6-004 processed_transcript Mus_musculus 0 254
ENSMUST00000147575 Cpa6-003 retained_intron Mus_musculus 9e-30 135

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