C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dehydrogenase/reductase (SDR family) member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154208 Dhrs3-001 ENSMUSG00000066026 10090 + 4:144893077-144928209 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000154208
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000154208 11.979±3.45 5.719±0.00 12.578±0.50 0.681±0.00 8.071±1.38 4.082±0.66 10.487±0.06 22.948±6.35 9.692±10.38 9.417±0.82 1.129±0.25 5.037±0.00 3.090±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MQ CIL_0003MQ_0002 CGP 4:144892827-145195005

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 IMP retinoid metabolic process
GO:0003151 IMP outflow tract morphogenesis
GO:0004745 IMP retinol dehydrogenase activity
GO:0016021 IEA integral component of membrane
GO:0030278 IMP regulation of ossification
GO:0042572 IEA retinol metabolic process
GO:0048387 IMP negative regulation of retinoic acid receptor signaling pathway
GO:0052650 IEA NADP-retinol dehydrogenase activity
GO:0055114 IEA oxidation-reduction process
GO:0060021 IMP palate development
GO:0060349 IMP bone morphogenesis
GO:0060411 IMP cardiac septum morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000430996 DHRS3-004 protein_coding Homo_sapiens 0 678
ENST00000616661 DHRS3-001 protein_coding Homo_sapiens 0 1421

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