C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SEC22 vesicle trafficking protein homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154216 Sec22a-003 ENSMUSG00000034473 10090 - 16:35348910-35363815 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryENSMUST00000154216
Transcript ID Adrenal Colon Ovary
ENSMUST00000154216 2.174±0.80 1.769±0.00 1.964±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008J4 CIL_0008J4_0002 VISTA 16:35298618-35902946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309934 SEC22A-002 protein_coding Homo_sapiens 0 385
ENST00000466519 SEC22A-005 protein_coding Homo_sapiens 0 385
ENST00000466950 SEC22A-007 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000469649 PDIA5-008 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000473494 SEC22A-003 protein_coding Homo_sapiens 0 385
ENST00000477063 SEC22A-008 processed_transcript Homo_sapiens 0 385
ENST00000480631 SEC22A-004 protein_coding Homo_sapiens 0 385
ENST00000481965 SEC22A-009 protein_coding Homo_sapiens 0 250
ENST00000487572 SEC22A-006 protein_coding Homo_sapiens 0 385
ENST00000491366 SEC22A-010 protein_coding Homo_sapiens 0 385
ENST00000492595 SEC22A-001 protein_coding Homo_sapiens 0 385

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