C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SHANK-associated RH domain interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154477 Sharpin-004 ENSMUSG00000022552 10090 - 15:76347041-76351047 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungOvaryENSMUST00000154477
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Ovary
ENSMUST00000154477 4.013±0.34 6.228±1.45 3.492±0.00 6.701±0.51 4.458±0.00 2.963±0.19 6.564±0.00 3.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_00026W CIL_00026W_0002 CGP 15:76343523-76351111
CIL_0006Y3 CIL_0006Y3_0003 CGP 15:76347040-76354380

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359551 SHARPIN-002 nonsense_mediated_decay Homo_sapiens 1.99965e-42 178
ENST00000398712 SHARPIN-001 protein_coding Homo_sapiens 0 448
ENST00000532536 SHARPIN-011 protein_coding Homo_sapiens 0 191

Loading