C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6851
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154478 Gm6851-001 ENSMUSG00000056836 10090 + 7:40190935-40191324 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverMuscleOvaryTestisENSMUST00000154478
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000154478 0.469±0.31 0.280±0.00 0.257±0.12 0.432±0.00 0.162±0.00 0.467±0.29 0.983±0.63 0.365±0.30 0.876±0.29 0.167±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218432 PIN4-002 protein_coding Homo_sapiens 0 351
ENST00000373662 PIN4-004 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000373669 PIN4-001 protein_coding Homo_sapiens 0 599
ENST00000413162 RP11-134G8.2-001 processed_pseudogene Homo_sapiens 0 425
ENST00000423432 PIN4-201 protein_coding Homo_sapiens 0 350
ENST00000439980 PIN4-006 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000446576 PIN4-003 protein_coding Homo_sapiens 0 303
ENST00000451079 PIN4P1-001 processed_pseudogene Homo_sapiens 0 588
ENST00000496835 PIN4-005 protein_coding Homo_sapiens 0 350
ENST00000558741 RP11-597K23.1-001 processed_pseudogene Homo_sapiens 0 521

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