C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 222
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154622 Krt222-003 ENSMUSG00000035849 10090 - 11:99234943-99238875 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLungOvaryTestisENSMUST00000154622
Transcript ID Adipose Adrenal Brain Colon Lung Ovary Testis
ENSMUST00000154622 0.249±0.00 0.167±0.00 10.045±0.00 0.141±0.08 0.206±0.03 0.236±0.19 0.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QH CIL_0004QH_0002 CGP 11:99209047-99244085
CIL_0000TP CIL_0000TP_0003 CGP 11:99232761-99285262

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394049 KRT222-002 nonsense_mediated_decay Homo_sapiens 0 675
ENST00000394052 KRT222-001 protein_coding Homo_sapiens 0 675
ENST00000476049 KRT222-001 nonsense_mediated_decay Homo_sapiens 0 675
ENST00000581564 KRT222-003 nonsense_mediated_decay Homo_sapiens 0 315

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