C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine rich repeat containing 8D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154807 Lrrc8d-007 ENSMUSG00000046079 10090 + 5:105732063-105812004 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastOvaryENSMUST00000154807
Transcript ID Adrenal Breast Ovary
ENSMUST00000154807 9.397±1.53 3.943±0.00 5.266±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069B CIL_00069B_0002 CGP 5:105699969-105915818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000148138 lrrc8a-001 protein_coding Danio_rerio 0.00000006 62
ENST00000337338 LRRC8D-001 protein_coding Homo_sapiens 0 494
ENST00000370453 RP11-302M6.4-001 nonsense_mediated_decay Homo_sapiens 0 422
ENST00000394593 LRRC8D-002 protein_coding Homo_sapiens 0 494
ENST00000414841 LRRC8D-003 protein_coding Homo_sapiens 0 494
ENST00000441269 LRRC8D-007 protein_coding Homo_sapiens 0 348
ENST00000525774 LRRC8D-004 protein_coding Homo_sapiens 6e-38 161
ENST00000527156 LRRC8D-006 protein_coding Homo_sapiens 0 503
ENST00000532201 LRRC8D-005 protein_coding Homo_sapiens 0 494

Loading