C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 8 family, member D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394593 LRRC8D-002 ENSG00000171492 9606 + 1:89821921-89936001 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394593
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394593 2.010±0.00 2.419±0.00 4.400±0.00 2.701±0.11 2.125±0.00 1.026±0.21 4.876±0.00 2.750±1.23 2.226±0.20 2.059±1.85 3.679±0.87 3.920±1.38 3.886±2.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069B CIL_00069B_0001 CGP 1:89821014-90035531

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120847 Lrrc8d-002 protein_coding Mus_musculus 0 3243
ENSMUST00000060531 Lrrc8d-001 protein_coding Mus_musculus 0 3096
ENSMUST00000154807 Lrrc8d-007 protein_coding Mus_musculus 0 494
ENSMUST00000127686 Lrrc8d-006 protein_coding Mus_musculus 0 339
ENSMUST00000149831 Lrrc8d-008 processed_transcript Mus_musculus 0 322
ENSMUST00000156630 Lrrc8d-005 protein_coding Mus_musculus 0 313

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