C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 5C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154938 Kdm5c-003 ENSMUSG00000025332 10090 + X:152233254-152246751 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062O CIL_00062O_0002 CGP X:152144268-152274535

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317961 KDM5D-001 protein_coding Homo_sapiens 7.00005e-41 174
ENST00000349663 KDM5C-011 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000375379 KDM5C-006 protein_coding Homo_sapiens 0 1369
ENST00000375383 KDM5C-007 protein_coding Homo_sapiens 0 612
ENST00000375401 KDM5C-005 protein_coding Homo_sapiens 0 1369
ENST00000382806 KDM5D-002 protein_coding Homo_sapiens 7.00005e-41 174
ENST00000404049 KDM5C-009 protein_coding Homo_sapiens 0 1336
ENST00000428012 KDM5C-013 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000429877 KDM5C-012 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000440077 KDM5D-004 protein_coding Homo_sapiens 5.99994e-41 174
ENST00000447300 KDM5D-003 protein_coding Homo_sapiens 1.99993e-41 174
ENST00000452825 KDM5C-201 protein_coding Homo_sapiens 0 612
ENST00000467093 KDM5C-003 processed_transcript Homo_sapiens 0 460
ENST00000495519 KDM5C-002 processed_transcript Homo_sapiens 0 381
ENST00000497995 KDM5C-014 retained_intron Homo_sapiens 2.94273e-44 182
ENST00000541639 KDM5D-201 protein_coding Homo_sapiens 7.00005e-41 174
ENST00000623344 KDM5D-202 protein_coding Homo_sapiens 5.99994e-41 174
ENST00000623754 AC010889.1-201 protein_coding Homo_sapiens 5.99994e-41 174
ENST00000624262 AC010889.2-201 protein_coding Homo_sapiens 5.99994e-41 174

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