C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 5D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447300 KDM5D-003 ENSG00000012817 9606 - Y:19721272-19744711 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189626 Kdm5d-006 retained_intron Mus_musculus 0 544
ENSMUST00000186696 Kdm5d-003 nonsense_mediated_decay Mus_musculus 0 544
ENSMUST00000055032 Kdm5d-001 protein_coding Mus_musculus 0 544
ENSMUST00000186726 Kdm5d-002 nonsense_mediated_decay Mus_musculus 0 534
ENSMUST00000189069 Kdm5d-004 protein_coding Mus_musculus 0 516
ENSMUST00000082177 Kdm5c-004 protein_coding Mus_musculus 0 459
ENSMUST00000112588 Kdm5c-001 protein_coding Mus_musculus 0 459
ENSMUST00000112584 Kdm5c-002 protein_coding Mus_musculus 0 459
ENSMUST00000187296 Kdm5d-008 retained_intron Mus_musculus 0 381
ENSMUST00000188910 Kdm5d-005 retained_intron Mus_musculus 0 351
ENSMUST00000154938 Kdm5c-003 retained_intron Mus_musculus 1.99993e-41 174

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