C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154961 Taf4a-003 ENSMUSG00000039117 10090 - 2:179922004-179929355 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000154961
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000154961 29.703±0.00 65.091±0.00 69.667±0.06 14.452±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000693 CIL_000693_0003 CGP 2:179442431-179976646
CIL_0001DN CIL_0001DN_0002 CGP 2:179912146-180035465

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252996 TAF4-001 protein_coding Homo_sapiens 0 710
ENST00000436129 TAF4-009 retained_intron Homo_sapiens 0 710
ENST00000488539 TAF4-004 protein_coding Homo_sapiens 0 431

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