C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin VB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154986 Myo5b-004 ENSMUSG00000025885 10090 + 18:74733765-74771477 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000154986
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000154986 1.054±0.12 0.964±0.00 3.775±1.84 2.567±3.00 1.205±0.44 11.083±0.00 2.510±0.55 11.442±1.27 1.473±0.61 0.067±0.03 2.935±0.63 2.193±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001F3 CIL_0001F3_0002 CGP 18:74283090-74771493

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285039 MYO5B-001 protein_coding Homo_sapiens 0 1615
ENST00000324581 MYO5B-006 protein_coding Homo_sapiens 0 1615
ENST00000431872 MYO5BP3-001 processed_pseudogene Homo_sapiens 0 1173
ENST00000449815 MYO5BP2-001 processed_pseudogene Homo_sapiens 0 1219
ENST00000590532 RP11-886H22.1-001 nonsense_mediated_decay Homo_sapiens 0 641
ENST00000592688 MYO5B-002 protein_coding Homo_sapiens 0 1618
ENST00000610994 RP11-4L24.1-001 processed_pseudogene Homo_sapiens 0 1208
ENST00000616031 MYO5B-201 protein_coding Homo_sapiens 0 315

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