C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Fas-associated factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155204 Faf1-003 ENSMUSG00000010517 10090 + 4:109840785-109925378 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENSMUST00000155204
Transcript ID Brain Placenta Testis
ENSMUST00000155204 1.765±0.00 5.324±0.00 5.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AC CIL_0009AC_0002 VISTA 4:109462244-110063771
CIL_0008US CIL_0008US_0002 VISTA 4:109505979-110107022
CIL_0008UT CIL_0008UT_0002 VISTA 4:109558711-110160443
CIL_0008K0 CIL_0008K0_0002 VISTA 4:109582013-110183287

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115419 faf1-201 protein_coding Danio_rerio 0 351
ENSDART00000034004 faf1-001 protein_coding Danio_rerio 0 351
ENST00000371778 FAF1-201 protein_coding Homo_sapiens 0 848
ENST00000396153 FAF1-001 protein_coding Homo_sapiens 0 941
ENST00000472808 FAF1-005 processed_transcript Homo_sapiens 0 704
ENST00000494400 FAF1-002 nonsense_mediated_decay Homo_sapiens 0 941

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