C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LSM14 homolog A (SCD6, S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155256 Lsm14a-003 ENSMUSG00000066568 10090 - 7:34353483-34375344 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryPlacentaTestisENSMUST00000155256
Transcript ID Brain Breast Ovary Placenta Testis
ENSMUST00000155256 16.125±0.00 8.530±0.00 41.827±0.00 47.466±10.95 9.701±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000403062 RP11-129H15.4-001 processed_pseudogene Homo_sapiens 0 324
ENST00000433627 LSM14A-003 protein_coding Homo_sapiens 0 466
ENST00000450182 AC010492.2-001 processed_pseudogene Homo_sapiens 0 388
ENST00000540746 LSM14A-002 protein_coding Homo_sapiens 0 440
ENST00000544216 LSM14A-001 protein_coding Homo_sapiens 0 466
ENST00000570386 LSM14A-003 retained_intron Homo_sapiens 0 440
ENST00000570462 LSM14A-002 protein_coding Homo_sapiens 0 466
ENST00000575697 LSM14A-005 protein_coding Homo_sapiens 0 902
ENST00000575811 LSM14A-001 protein_coding Homo_sapiens 0 466
ENST00000586157 LSM14A-004 protein_coding Homo_sapiens 0 902
ENST00000588582 LSM14A-005 retained_intron Homo_sapiens 0 440
ENST00000610736 AC010492.2-001 processed_pseudogene Homo_sapiens 2.99878e-43 180
ENST00000613015 XXbac-BPG111L9.8-001 processed_pseudogene Homo_sapiens 1.99993e-41 174
ENST00000618764 XXbac-BCX105G6.12-001 processed_pseudogene Homo_sapiens 0 189

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