C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LSM14A, SCD6 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433627 LSM14A-003 ENSG00000257103 9606 + 19:34172568-34229288 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000433627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000433627 9.136±0.00 16.464±0.00 1.225±0.00 9.721±0.00 6.087±1.93 6.353±0.00 7.222±0.00 8.544±6.88 4.793±0.00 4.267±2.06 17.321±0.00 14.136±7.36 12.508±1.48 7.988±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0005737 IDA cytoplasm
GO:0006417 IEA regulation of translation
GO:0007275 IEA multicellular organismal development
GO:0010494 IDA cytoplasmic stress granule
GO:0033962 IDA cytoplasmic mRNA processing body assembly
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085585 Lsm14a-001 protein_coding Mus_musculus 0 2920
ENSMUST00000133046 Lsm14a-002 protein_coding Mus_musculus 0 540
ENSMUST00000155256 Lsm14a-003 protein_coding Mus_musculus 0 466
ENSMUST00000055485 Lsm14b-001 protein_coding Mus_musculus 0 209

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