C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exosome component 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155866 Exosc9-002 ENSMUSG00000027714 10090 + 3:36552606-36563271 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverOvaryPlacentaTestisENSMUST00000155866
Transcript ID Adipose Brain Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000155866 1.065±0.00 9.019±0.00 1.255±0.15 1.434±0.05 1.349±0.21 8.926±0.00 9.689±1.85 3.572±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KG CIL_0000KG_0002 CGP 3:36552606-36572150

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 TAS nucleolus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243498 EXOSC9-001 protein_coding Homo_sapiens 0 1295
ENST00000379663 EXOSC9-003 protein_coding Homo_sapiens 0 1295
ENST00000503139 EXOSC9-006 processed_transcript Homo_sapiens 0 294
ENST00000503236 EXOSC9-012 processed_transcript Homo_sapiens 8e-27 124
ENST00000506201 EXOSC9-010 retained_intron Homo_sapiens 0 313
ENST00000508212 EXOSC9-009 processed_transcript Homo_sapiens 0 525
ENST00000509800 EXOSC9-008 protein_coding Homo_sapiens 0 490
ENST00000509980 EXOSC9-002 processed_transcript Homo_sapiens 0 1297
ENST00000511132 EXOSC9-011 protein_coding Homo_sapiens 0 296
ENST00000511454 EXOSC9-007 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000512454 EXOSC9-005 protein_coding Homo_sapiens 0 1236
ENST00000513654 EXOSC9-004 nonsense_mediated_decay Homo_sapiens 0 1419

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