C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exosome component 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513654 EXOSC9-004 ENSG00000123737 9606 + 4:121801323-121817021 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungOvaryENST00000513654
Transcript ID Brain Breast Colon Heart Liver Lung Ovary
ENST00000513654 0.598±0.24 0.392±0.00 0.631±0.00 0.101±0.00 0.439±0.00 0.386±0.02 1.069±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KG CIL_0000KG_0001 CGP 4:121801317-121823933

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0045111 IDA intermediate filament cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155866 Exosc9-002 nonsense_mediated_decay Mus_musculus 0 1419
ENSMUST00000029269 Exosc9-001 protein_coding Mus_musculus 0 1293
ENSMUST00000133854 Exosc9-005 retained_intron Mus_musculus 0 885
ENSMUST00000136890 Exosc9-006 protein_coding Mus_musculus 0 736
ENSMUST00000149041 Exosc9-007 retained_intron Mus_musculus 0 604
ENSMUST00000138636 Exosc9-009 retained_intron Mus_musculus 0 459
ENSMUST00000156100 Exosc9-010 processed_transcript Mus_musculus 0 324

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