C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptophysin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156371 Sypl2-002 ENSMUSG00000027887 10090 - 3:108217301-108226643 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryENSMUST00000156371
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary
ENSMUST00000156371 0.084±0.00 0.246±0.13 0.270±0.00 0.038±0.00 0.212±0.08 12.344±0.00 0.029±0.01 0.079±0.00 0.113±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369872 SYPL2-001 protein_coding Homo_sapiens 0 634
ENST00000475497 SYPL2-002 processed_transcript Homo_sapiens 0 231

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