C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Aly/REF export factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156685 Alyref-003 ENSMUSG00000025134 10090 - 11:120595616-120598231 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000156685
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000156685 4.755±0.00 9.051±1.97 9.306±0.00 26.110±0.00 7.522±1.78 2.352±0.35 3.691±0.97 3.549±2.15 6.727±2.14 76.090±0.00 44.804±52.72 7.957±5.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M2 CIL_0004M2_0002 CGP 11:120578104-120598365
CIL_0004M3 CIL_0004M3_0002 CGP 11:120592121-120608198

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000504015 ALYREF-004 processed_transcript Homo_sapiens 3.00018e-42 174
ENST00000505490 ALYREF-001 protein_coding Homo_sapiens 0 473
ENST00000512673 ALYREF-003 processed_transcript Homo_sapiens 0 407

Loading