C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004M2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141522-ENSG00000183684 CGP 9606 17:81867721-81891586
GeneTranscriptPositionBiotype
ENSG00000141522 (ARHGDIA)
Rho GDP dissociation inhibitor (GDI) alpha 		ENST00000269321 (ARHGDIA-001) 81867721-81871406 protein_coding
ENST00000400721 (ARHGDIA-002) 81867897-81871376 protein_coding
ENST00000541078 (ARHGDIA-012) 81868340-81870974 protein_coding
ENST00000578351 (ARHGDIA-004) 81869049-81871326 nonsense_mediated_decay
ENST00000579121 (ARHGDIA-013) 81868506-81870664 protein_coding
ENST00000580033 (ARHGDIA-011) 81868922-81871325 nonsense_mediated_decay
ENST00000580685 (ARHGDIA-015) 81868366-81870006 protein_coding
ENST00000581876 (ARHGDIA-016) 81868611-81871324 protein_coding
ENST00000582309 (ARHGDIA-014) 81869523-81870265 retained_intron
ENST00000582520 (ARHGDIA-018) 81867721-81868630 processed_transcript
ENST00000582984 (ARHGDIA-007) 81868870-81871337 retained_intron
ENST00000583111 (ARHGDIA-010) 81869166-81871329 retained_intron
ENST00000583499 (ARHGDIA-008) 81869438-81871337 retained_intron
ENST00000583791 (ARHGDIA-017) 81869004-81869451 retained_intron
ENST00000583868 (ARHGDIA-006) 81868631-81871337 protein_coding
ENST00000584397 (ARHGDIA-005) 81869302-81871378 retained_intron
ENST00000584461 (ARHGDIA-009) 81868260-81871329 protein_coding
ENSG00000141552 (ANAPC11)
anaphase promoting complex subunit 11 		ENST00000344877 (ANAPC11-003) 81891721-81900533 protein_coding
ENST00000357385 (ANAPC11-001) 81891739-81900254 protein_coding
ENST00000392376 (ANAPC11-006) 81891938-81900254 protein_coding
ENST00000571024 (ANAPC11-005) 81891723-81900356 protein_coding
ENST00000571570 (ANAPC11-009) 81890790-81900255 protein_coding
ENST00000571874 (ANAPC11-015) 81891746-81900254 protein_coding
ENST00000572639 (ANAPC11-010) 81891647-81900255 protein_coding
ENST00000572851 (ANAPC11-004) 81891735-81900356 protein_coding
ENST00000573956 (ANAPC11-008) 81898120-81900255 retained_intron
ENST00000574924 (ANAPC11-002) 81891732-81900356 protein_coding
ENST00000575195 (ANAPC11-007) 81894298-81900991 protein_coding
ENST00000577425 (ANAPC11-013) 81891723-81900253 protein_coding
ENST00000577747 (ANAPC11-020) 81891760-81900254 protein_coding
ENST00000578544 (ANAPC11-021) 81893555-81900104 protein_coding
ENST00000578550 (ANAPC11-016) 81891750-81900159 protein_coding
ENST00000579133 (ANAPC11-017) 81891772-81900254 protein_coding
ENST00000579978 (ANAPC11-011) 81891720-81900252 protein_coding
ENST00000582222 (ANAPC11-012) 81891723-81894807 protein_coding
ENST00000583839 (ANAPC11-019) 81892063-81900254 protein_coding
ENST00000584197 (ANAPC11-018) 81892011-81899940 protein_coding
ENST00000584314 (ANAPC11-014) 81891741-81894839 protein_coding
ENST00000585259 (ANAPC11-022) 81894466-81900046 protein_coding
ENST00000612413 (ANAPC11-201) 81891713-81900533 protein_coding
ENSG00000263731 (RP11-498C9.15)
 ENST00000582866 (RP11-498C9.15-001) 81878425-81881106 lincRNA
ENSG00000263859 (RP11-498C9.16)
 ENST00000579981 (RP11-498C9.16-001) 81878667-81879557 lincRNA
CIL_0004M2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025132-ENSMUSG00000025134 CGP 10090 11:120578104-120598365
GeneTranscriptPositionBiotype
ENSMUSG00000025132 (Arhgdia)
Rho GDP dissociation inhibitor (GDI) alpha 		ENSMUST00000067936 (Arhgdia-002) 120578109-120581380 protein_coding
ENSMUST00000106197 (Arhgdia-001) 120578104-120581624 protein_coding
ENSMUSG00000025134 (Alyref)
Aly/REF export factor 		ENSMUST00000026125 (Alyref-001) 120592121-120598365 protein_coding
ENSMUST00000155325 (Alyref-002) 120594509-120595657 processed_transcript
ENSMUST00000156685 (Alyref-003) 120595616-120598231 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004M2_0001ENSG00000141522ENST00000269321ENST00000400721ENST00000578351ENST00000579121ENST00000580685ENST00000583111ENST00000584397ENST00000584461ENSG00000141552ENST00000344877ENST00000574924ENST00000578550ENST00000579978ENSG00000263731ENST00000582866ENSG00000263859ENST00000579981CIL_0004M2_0002ENSMUSG00000025132ENSMUST00000067936ENSMUST00000106197ENSMUSG00000025134ENSMUST00000026125ENSMUST00000155325ENSMUST00000156685
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141522 ENST00000269321 169.923±0.00 171.536±0.00 1.608±0.00 51.659±44.60 55.392±50.30 53.492±45.63 20.096±18.68 58.564±51.36 26.273±22.29 111.175±107.49 29.634±26.35 103.915±87.73 198.690±93.42 63.158±36.04
ENST00000400721 40.294±0.00 52.169±0.00 1.061±0.00 N/A 24.188±0.00 30.862±0.00 N/A N/A N/A N/A N/A 1.703±0.00 N/A 22.423±0.00
ENST00000541078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578351 N/A N/A N/A N/A 9.091±0.00 N/A 1.450±0.00 10.356±0.00 4.066±0.00 N/A N/A N/A N/A N/A
ENST00000579121 N/A N/A N/A N/A N/A N/A N/A N/A 2.287±0.00 N/A N/A 3.033±0.00 N/A N/A
ENST00000580033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580685 N/A N/A 1.795±0.00 N/A 5.305±0.00 5.312±0.00 N/A N/A N/A N/A N/A 47.270±0.00 92.680±0.00 23.990±0.00
ENST00000581876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583111 N/A N/A N/A N/A N/A N/A 1.065±0.00 N/A N/A 8.351±0.00 N/A N/A N/A N/A
ENST00000583499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584397 N/A N/A N/A N/A N/A N/A N/A N/A 3.436±0.00 N/A N/A N/A N/A N/A
ENST00000584461 56.054±0.00 N/A N/A N/A 32.394±0.00 N/A N/A 58.689±0.00 N/A N/A N/A 21.377±0.00 N/A 14.394±0.00
ENSG00000141552 ENST00000344877 N/A N/A N/A N/A N/A N/A 4.816±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000357385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.939±0.00 N/A N/A N/A
ENST00000575195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578550 N/A N/A N/A N/A N/A N/A 33.098±0.00 N/A N/A 38.957±0.00 N/A N/A N/A N/A
ENST00000579133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579978 42.553±0.00 78.779±0.00 N/A 39.171±0.00 54.073±0.00 55.302±0.00 35.687±0.00 54.269±0.00 63.840±0.00 63.178±0.00 29.037±18.73 N/A 56.108±7.50 N/A
ENST00000582222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263731 ENST00000582866 0.404±0.00 1.044±0.00 0.036±0.00 0.628±0.01 0.462±0.25 0.596±0.26 0.115±0.05 0.597±0.00 0.254±0.01 0.258±0.00 0.550±0.00 0.703±0.23 0.281±0.14 0.707±0.05
ENSG00000263859 ENST00000579981 0.516±0.00 1.560±0.00 N/A 0.988±0.00 0.454±0.40 0.530±0.15 0.150±0.12 1.899±0.00 0.356±0.25 0.347±0.14 0.393±0.00 0.904±0.62 0.356±0.03 0.850±0.33
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025132 ENSMUST00000067936 N/A N/A N/A 35.070±0.00 N/A N/A N/A N/A N/A N/A N/A 10.336±0.00 24.783±5.17 10.618±3.28
ENSMUST00000106197 219.802±44.03 276.675±6.98 184.868±12.80 156.177±74.68 283.416±91.82 307.329±40.84 67.049±14.20 202.979±19.24 104.892±45.87 361.183±43.95 32.591±2.06 257.828±101.37 234.414±94.12 22.918±10.14
ENSMUSG00000025134 ENSMUST00000026125 10.641±6.84 3.881±2.10 6.597±0.00 6.518±3.64 3.151±0.53 10.714±4.30 1.884±0.37 4.190±2.05 5.519±4.52 3.733±0.85 1.784±0.35 17.588±9.81 6.627±5.03 4.048±1.75
ENSMUST00000155325 10.329±0.32 4.772±1.00 19.326±0.00 12.997±8.14 4.302±1.08 N/A 3.883±0.78 9.775±2.33 35.044±40.41 10.541±1.37 4.968±0.48 25.279±4.44 42.410±20.41 8.774±1.72
ENSMUST00000156685 4.755±0.00 9.051±1.97 9.306±0.00 26.110±0.00 7.522±1.78 N/A 2.352±0.35 3.691±0.97 3.549±2.15 6.727±2.14 N/A 76.090±0.00 44.804±52.72 7.957±5.49

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