C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Aly/REF export factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000512673 ALYREF-003 ENSG00000183684 9606 - 17:81888901-81891394 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000512673
Transcript ID Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000512673 15.264±0.00 30.086±0.00 15.401±0.00 36.270±0.00 11.226±0.00 15.773±0.00 26.134±0.00 172.604±136.61 307.205±0.00 400.387±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M2 CIL_0004M2_0001 CGP 17:81867721-81891586
CIL_0004M3 CIL_0004M3_0001 CGP 17:81887844-81900991

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156685 Alyref-003 retained_intron Mus_musculus 0 407
ENSMUST00000026125 Alyref-001 protein_coding Mus_musculus 0 407
ENSMUST00000081527 Alyref2-201 protein_coding Mus_musculus 0 307

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