C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159012 Itga11-002 ENSMUSG00000032243 10090 + 9:62677860-62777111 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000159012
Transcript ID Adrenal Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000159012 0.175±0.00 0.569±0.00 0.192±0.07 0.114±0.00 0.024±0.01 0.210±0.10 0.773±0.00 0.048±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FN CIL_0008FN_0002 VISTA 9:62114649-62715677
CIL_00080E CIL_00080E_0002 VISTA 9:62138578-62752434
CIL_0004FA CIL_0004FA_0002 CGP 9:62677826-62811648

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315757 ITGA11-201 protein_coding Homo_sapiens 0 3797
ENST00000423218 ITGA11-001 protein_coding Homo_sapiens 0 3795
ENST00000562826 ITGA11-009 processed_transcript Homo_sapiens 0 802
ENST00000565868 ITGA11-008 retained_intron Homo_sapiens 0 420
ENST00000566429 ITGA11-006 processed_transcript Homo_sapiens 0 424
ENST00000568677 ITGA11-007 retained_intron Homo_sapiens 0 494
ENST00000569346 ITGA11-005 retained_intron Homo_sapiens 0 577

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