C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 6374
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159051 Gm6374-001 ENSMUSG00000079140 10090 + 1:83314513-83315300 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartPlacentaTestisENSMUST00000159051
Transcript ID Brain Heart Placenta Testis
ENSMUST00000159051 0.056±0.03 0.053±0.00 0.007±0.00 0.183±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AJ CIL_0004AJ_0003 CGP 1:83159752-83408200
CIL_0004AK CIL_0004AK_0003 CGP 1:83254139-84364180

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297908 MRRF-201 protein_coding Homo_sapiens 0 527
ENST00000344641 MRRF-001 protein_coding Homo_sapiens 0 830
ENST00000373723 MRRF-010 protein_coding Homo_sapiens 0 592
ENST00000373728 MRRF-003 retained_intron Homo_sapiens 0.0000000000004 81
ENST00000373729 MRRF-004 protein_coding Homo_sapiens 0 804
ENST00000394315 MRRF-202 protein_coding Homo_sapiens 0 592
ENST00000435941 MRRFP1-001 processed_pseudogene Homo_sapiens 0 758
ENST00000467864 MRRF-009 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000470366 MRRF-008 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000489572 MRRF-002 nonsense_mediated_decay Homo_sapiens 0 379

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