C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prenyl (solanesyl) diphosphate synthase, subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159139 Pdss2-006 ENSMUSG00000038240 10090 + 10:43221600-43464882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryENSMUST00000159139
Transcript ID Adrenal Breast Colon Lung Ovary
ENSMUST00000159139 13.559±1.76 2.302±0.00 8.078±1.51 2.255±0.36 4.991±2.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000010 IDA trans-hexaprenyltranstransferase activity
GO:0005739 IDA mitochondrion
GO:0006744 IEA ubiquinone biosynthetic process
GO:0008299 IDA isoprenoid biosynthetic process
GO:0046982 IDA protein heterodimerization activity
GO:0050347 IDA trans-octaprenyltranstransferase activity
GO:0050878 IMP regulation of body fluid levels
GO:0051290 IPI protein heterotetramerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369031 PDSS2-002 protein_coding Homo_sapiens 0 734
ENST00000369037 PDSS2-001 protein_coding Homo_sapiens 0 1221
ENST00000449027 PDSS2-003 protein_coding Homo_sapiens 0 241

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