C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesencephalic astrocyte-derived neurotrophic factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159283 Manf-001 ENSMUSG00000032575 10090 - 9:106887415-106891979 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000159283
Transcript ID Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000159283 9.367±0.00 6.490±0.00 7.795±2.61 10.055±2.66 21.912±0.00 25.723±1.40 35.516±8.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MV CIL_0005MV_0003 CGP 9:106838312-106891979

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002014 IDA vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0044822 IEA poly(A) RNA binding
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000446668 MANF-003 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000470900 MANF-002 processed_transcript Homo_sapiens 0 763
ENST00000482262 MANF-004 retained_intron Homo_sapiens 0 488
ENST00000528157 MANF-001 protein_coding Homo_sapiens 0 876

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