C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinol dehydrogenase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159500 Rdh11-003 ENSMUSG00000066441 10090 - 12:79176165-79191793 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000159500
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000159500 2.921±0.47 3.701±1.54 2.823±1.62 2.800±0.91 0.527±0.09 3.763±0.80 11.496±2.67 2.347±0.39 0.738±0.00 7.147±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MK CIL_0001MK_0002 CGP 12:79156017-79192293
CIL_0002CM CIL_0002CM_0002 CGP 12:79174337-79222665

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001917 IDA photoreceptor inner segment
GO:0016062 IMP adaptation of rhodopsin mediated signaling
GO:0042572 ISO retinol metabolic process
GO:0042574 ISO retinal metabolic process
GO:0052650 ISO NADP-retinol dehydrogenase activity

Homologs

No Homologs available.

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