C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Vpr (HIV-1) binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159645 Vprbp-001 ENSMUSG00000040325 10090 + 9:106821874-106880443 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000159645
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000159645 6.132±2.95 6.437±0.00 4.703±0.00 3.853±0.17 9.099±0.86 3.132±0.30 3.634±0.38 4.040±0.77 5.823±0.80 12.871±2.02 12.333±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008180 IEA COP9 signalosome
GO:0016032 IEA viral process
GO:0016567 IEA protein ubiquitination
GO:0030183 IMP B cell differentiation
GO:0033151 IMP V(D)J recombination
GO:0035212 ISS cell competition in a multicellular organism
GO:1990244 ISS histone kinase activity (H2A-T120 specific)
GO:1990245 ISS histone H2A-T120 phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335891 VPRBP-201 protein_coding Homo_sapiens 0 3112
ENST00000423656 VPRBP-001 protein_coding Homo_sapiens 0 6008
ENST00000504652 VPRBP-202 protein_coding Homo_sapiens 0 5995

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