C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PRP3 pre-mRNA processing factor 3 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159901 Prpf3-010 ENSMUSG00000015748 10090 - 3:95830589-95835665 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverENSMUST00000159901
Transcript ID Breast Heart Kidney Liver
ENSMUST00000159901 6.233±2.68 3.573±0.46 4.357±0.80 2.743±1.64

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0046540 IEA U4/U6 x U5 tri-snRNP complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324862 PRPF3-001 protein_coding Homo_sapiens 0 440
ENST00000467329 PRPF3-007 processed_transcript Homo_sapiens 0 440
ENST00000470824 PRPF3-005 processed_transcript Homo_sapiens 0 442
ENST00000519029 RP11-409C19.2-001 processed_pseudogene Homo_sapiens 0 291

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