C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: laminin, beta 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159955 Lamb3-002 ENSMUSG00000026639 10090 + 1:193302243-193343875 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000159955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000159955 1.042±0.23 0.106±0.01 3.888±0.00 0.134±0.00 1.093±0.20 13.307±0.00 1.229±0.37 0.211±0.00 0.595±0.30 0.138±0.02 1.313±0.65 0.264±0.05 1.420±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZL CIL_0007ZL_0002 VISTA 1:192841048-193441723
CIL_00089N CIL_00089N_0002 VISTA 1:193149329-193750185

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 TAS extracellular region
GO:0005604 IDA basement membrane
GO:0005610 IDA laminin-5 complex
GO:0007155 IEA cell adhesion
GO:0050873 IDA brown fat cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356082 LAMB3-001 protein_coding Homo_sapiens 0 3064
ENST00000367030 LAMB3-002 protein_coding Homo_sapiens 0 3064
ENST00000391911 LAMB3-201 protein_coding Homo_sapiens 0 3064
ENST00000415782 LAMB3-003 protein_coding Homo_sapiens 0 518

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