C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeodomain interacting protein kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160360 Hipk2-002 ENSMUSG00000061436 10090 - 6:38697889-38875971 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000160360
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000160360 3.288±0.00 11.145±2.53 5.669±0.98 2.641±0.28 5.093±1.11 3.473±0.73 7.653±1.70 6.399±2.13 1.820±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030C CIL_00030C_0002 CGP 6:38663069-38876165
CIL_00023M CIL_00023M_0003 CGP 6:38694390-39084585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001102 IPI RNA polymerase II activating transcription factor binding
GO:0001105 IMP RNA polymerase II transcription coactivator activity
GO:0001934 IGI positive regulation of protein phosphorylation
GO:0003714 IDA transcription corepressor activity
GO:0004672 IDA protein kinase activity
GO:0004674 ISA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006468 IDA protein phosphorylation
GO:0007179 IMP transforming growth factor beta receptor signaling pathway
GO:0007224 IGI smoothened signaling pathway
GO:0007628 IMP adult walking behavior
GO:0008284 IGI positive regulation of cell proliferation
GO:0008344 IMP adult locomotory behavior
GO:0009952 IGI anterior/posterior pattern specification
GO:0010842 IMP retina layer formation
GO:0016605 TAS PML body
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0018107 IDA peptidyl-threonine phosphorylation
GO:0030182 IMP neuron differentiation
GO:0030511 ISS positive regulation of transforming growth factor beta receptor signaling pathway
GO:0032092 IDA positive regulation of protein binding
GO:0042771 IGI intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0043388 IDA positive regulation of DNA binding
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046330 ISS positive regulation of JNK cascade
GO:0046790 ISS virion binding
GO:0048596 IMP embryonic camera-type eye morphogenesis
GO:0050882 IMP voluntary musculoskeletal movement
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0060059 IMP embryonic retina morphogenesis in camera-type eye
GO:0060235 IMP lens induction in camera-type eye
GO:0061072 IMP iris morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000062343 hipk2-201 protein_coding Danio_rerio 0 1090
ENSDART00000090335 hipk2-001 protein_coding Danio_rerio 0 1090
ENSDART00000093061 HIPK1 (1 of 2)-201 protein_coding Danio_rerio 0 640
ENSDART00000134061 HIPK1 (1 of 2)-001 protein_coding Danio_rerio 0 632
ENST00000342645 HIPK2-201 protein_coding Homo_sapiens 0 2449
ENST00000369555 HIPK1-004 protein_coding Homo_sapiens 0 837
ENST00000369558 HIPK1-001 protein_coding Homo_sapiens 0 837
ENST00000369559 HIPK1-002 protein_coding Homo_sapiens 0 837
ENST00000369561 HIPK1-009 protein_coding Homo_sapiens 0 822
ENST00000406875 HIPK2-001 protein_coding Homo_sapiens 0 2636
ENST00000426820 HIPK1-006 protein_coding Homo_sapiens 0 837
ENST00000428878 HIPK2-002 protein_coding Homo_sapiens 0 4924

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