C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeodomain interacting protein kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428878 HIPK2-002 ENSG00000064393 9606 - 7:139572629-139777778 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000428878
Transcript ID Bladder
ENST00000428878 4.782±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030C CIL_00030C_0001 CGP 7:139523856-139777778
CIL_00023M CIL_00023M_0002 CGP 7:139561570-140020325

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001102 ISS RNA polymerase II activating transcription factor binding
GO:0001105 ISS RNA polymerase II transcription coactivator activity
GO:0001654 ISS eye development
GO:0003714 IDA transcription corepressor activity
GO:0004672 IDA:IEA protein kinase activity
GO:0004674 ISS protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006468 IDA:IEA protein phosphorylation
GO:0006978 IDA DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016604 IDA nuclear body
GO:0016605 IDA PML body
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor
GO:0018105 ISS peptidyl-serine phosphorylation
GO:0018107 ISS peptidyl-threonine phosphorylation
GO:0019048 NAS modulation by virus of host morphology or physiology
GO:0030218 ISS erythrocyte differentiation
GO:0030511 IMP positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 IMP negative regulation of BMP signaling pathway
GO:0030578 TAS PML body organization
GO:0032092 ISS positive regulation of protein binding
GO:0042771 TAS intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:0045766 IDA positive regulation of angiogenesis
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046330 IMP positive regulation of JNK cascade
GO:0046332 IPI SMAD binding
GO:0046790 IPI virion binding
GO:0051091 ISS positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051726 TAS regulation of cell cycle
GO:0060395 IDA SMAD protein signal transduction
GO:0071456 TAS cellular response to hypoxia
GO:0097193 NAS intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160360 Hipk2-002 protein_coding Mus_musculus 0 4924
ENSMUST00000162359 Hipk2-003 protein_coding Mus_musculus 0 4874
ENSMUST00000160962 Hipk2-001 protein_coding Mus_musculus 0 4656
ENSMUST00000161779 Hipk2-004 protein_coding Mus_musculus 0 2726
ENSMUST00000114855 Hipk2-005 retained_intron Mus_musculus 0 1522
ENSDART00000062343 hipk2-201 protein_coding Danio_rerio 0 1162
ENSDART00000090335 hipk2-001 protein_coding Danio_rerio 0 1162
ENSMUST00000135634 Hipk1-006 retained_intron Mus_musculus 0 795
ENSMUST00000137078 Hipk1-002 nonsense_mediated_decay Mus_musculus 0 795
ENSMUST00000029438 Hipk1-003 protein_coding Mus_musculus 0 795
ENSMUST00000106845 Hipk1-005 protein_coding Mus_musculus 0 795
ENSMUST00000118317 Hipk1-001 protein_coding Mus_musculus 0 795
ENSMUST00000121324 Hipk1-004 protein_coding Mus_musculus 0 776
ENSMUST00000159894 Hipk2-007 retained_intron Mus_musculus 0 610
ENSMUST00000159307 Hipk2-006 processed_transcript Mus_musculus 0 460

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