C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor II H, polypeptide 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160752 Gtf2h4-008 ENSMUSG00000001524 10090 - 17:35667830-35673703 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSMUST00000160752
Transcript ID Heart
ENSMUST00000160752 0.999±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000439 IEA core TFIIH complex
GO:0004003 IEA ATP-dependent DNA helicase activity
GO:0006289 IEA nucleotide-excision repair
GO:0032508 IEA DNA duplex unwinding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259895 GTF2H4-001 protein_coding Homo_sapiens 0 1941
ENST00000376316 GTF2H4-002 protein_coding Homo_sapiens 0 1899
ENST00000376326 GTF2H4-001 protein_coding Homo_sapiens 0 1941
ENST00000400450 GTF2H4-002 protein_coding Homo_sapiens 0 1899
ENST00000413314 GTF2H4-001 protein_coding Homo_sapiens 0 1941
ENST00000416161 GTF2H4-003 protein_coding Homo_sapiens 0 520
ENST00000416773 GTF2H4-002 protein_coding Homo_sapiens 0 1899
ENST00000423849 GTF2H4-003 protein_coding Homo_sapiens 0 520
ENST00000423881 GTF2H4-002 protein_coding Homo_sapiens 0 1899
ENST00000430576 GTF2H4-003 protein_coding Homo_sapiens 0 520
ENST00000434226 GTF2H4-001 protein_coding Homo_sapiens 0 1941
ENST00000435498 GTF2H4-002 protein_coding Homo_sapiens 0 1899
ENST00000438348 GTF2H4-002 protein_coding Homo_sapiens 0 1905
ENST00000440824 GTF2H4-001 protein_coding Homo_sapiens 0 1941
ENST00000453897 GTF2H4-003 protein_coding Homo_sapiens 0 520
ENST00000454718 GTF2H4-003 protein_coding Homo_sapiens 0 520
ENST00000456195 GTF2H4-003 protein_coding Homo_sapiens 0 520
ENST00000456968 GTF2H4-001 protein_coding Homo_sapiens 0 1941
ENST00000459745 GTF2H4-004 retained_intron Homo_sapiens 0 894
ENST00000459816 GTF2H4-005 retained_intron Homo_sapiens 0 621
ENST00000461964 GTF2H4-006 retained_intron Homo_sapiens 0 383
ENST00000464084 VARSL-002 retained_intron Homo_sapiens 0 1325
ENST00000468446 GTF2H4-005 retained_intron Homo_sapiens 0 621
ENST00000469311 VARS2-002 retained_intron Homo_sapiens 0 1325
ENST00000469489 VARSL-002 retained_intron Homo_sapiens 0 1325
ENST00000469650 GTF2H4-005 retained_intron Homo_sapiens 0 621
ENST00000469920 GTF2H4-006 retained_intron Homo_sapiens 0 383
ENST00000470485 GTF2H4-005 retained_intron Homo_sapiens 0 621
ENST00000472251 GTF2H4-004 retained_intron Homo_sapiens 0 894
ENST00000473009 GTF2H4-006 retained_intron Homo_sapiens 0 383
ENST00000475673 VARS2-002 retained_intron Homo_sapiens 0 1325
ENST00000475845 GTF2H4-005 retained_intron Homo_sapiens 0 621
ENST00000477288 VARS2-002 retained_intron Homo_sapiens 0 1325
ENST00000480149 GTF2H4-004 retained_intron Homo_sapiens 0 894
ENST00000481309 GTF2H4-006 retained_intron Homo_sapiens 0 383
ENST00000483318 GTF2H4-006 retained_intron Homo_sapiens 0 383
ENST00000484029 GTF2H4-004 retained_intron Homo_sapiens 0 894
ENST00000486591 GTF2H4-005 retained_intron Homo_sapiens 0 621
ENST00000487746 GTF2H4-004 retained_intron Homo_sapiens 0 894
ENST00000493326 VARS2-002 retained_intron Homo_sapiens 0 1325
ENST00000494704 GTF2H4-004 retained_intron Homo_sapiens 0 900
ENST00000496881 GTF2H4-006 retained_intron Homo_sapiens 0 383

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