C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: prenyl (solanesyl) diphosphate synthase, subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160823 Pdss2-004 ENSMUSG00000038240 10090 + 10:43221486-43405395 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungTestisENSMUST00000160823
Transcript ID Brain Breast Lung Testis
ENSMUST00000160823 0.375±0.00 0.176±0.00 0.297±0.00 0.010±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008299 IEA isoprenoid biosynthetic process
GO:0050347 IDA trans-octaprenyltranstransferase activity
GO:0050878 IMP regulation of body fluid levels
GO:0051290 IPI protein heterotetramerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369031 PDSS2-002 protein_coding Homo_sapiens 0 771
ENST00000369037 PDSS2-001 protein_coding Homo_sapiens 0 1227
ENST00000449027 PDSS2-003 protein_coding Homo_sapiens 0 239

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