C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | plakophilin 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000160869  |
Pkp3-008 |
ENSMUSG00000054065 |
10090 | + |
7:141079780-141082695  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002UH | CIL_0002UH_0002 | CGP | 7:141061274-141090510 |
| CIL_0002AQ | CIL_0002AQ_0002 | CGP | 7:141078218-141100546 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | ISS | nucleus |
| GO:0005914 | ISS | spot adherens junction |
| GO:0016337 | IEA | single organismal cell-cell adhesion |
| GO:0030057 | IDA | desmosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000331563
|
PKP3-001 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000527442
|
PKP3-004 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000528036
|
PKP3-005 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000530695
|
PKP3-011 | processed_transcript | Homo_sapiens | 0 | 254 |
|
ENST00000531857
|
PKP3-006 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000533069
|
PKP3-007 | retained_intron | Homo_sapiens | 3e-36 | 156 |
|
ENST00000533249
|
PKP3-003 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000534401
|
PKP3-002 | protein_coding | Homo_sapiens | 0 | 254 |
