C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: plakophilin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531857 PKP3-006 ENSG00000184363 9606 + 11:394243-397312 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000531857
Transcript ID Liver
ENST00000531857 1.131±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UH CIL_0002UH_0001 CGP 11:369796-404908
CIL_0002AQ CIL_0002AQ_0001 CGP 11:392614-417455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030057 IEA desmosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163041 Pkp3-006 protein_coding Mus_musculus 0 606
ENSMUST00000066873 Pkp3-001 protein_coding Mus_musculus 0 606
ENSMUST00000106039 Pkp3-002 protein_coding Mus_musculus 0 606
ENSMUST00000160869 Pkp3-008 nonsense_mediated_decay Mus_musculus 0 254
ENSMUST00000159375 Pkp3-004 protein_coding Mus_musculus 0 215

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