C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161211 Med6-001 ENSMUSG00000002679 10090 - 12:81573557-81595006 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161211
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161211 2.127±0.07 6.508±1.72 8.167±3.88 0.944±0.00 1.448±0.00 1.989±0.63 3.679±0.59 8.137±5.33 2.767±0.86 1.426±1.00 2.210±1.74 14.160±10.78 4.909±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WZ CIL_0002WZ_0003 CGP 12:81573557-81664941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 ISO mediator complex
GO:0019827 IMP stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256379 MED6-001 protein_coding Homo_sapiens 0 1033
ENST00000430055 MED6-004 protein_coding Homo_sapiens 0 935
ENST00000439659 MED6P1-001 processed_pseudogene Homo_sapiens 0 228
ENST00000440435 MED6-002 protein_coding Homo_sapiens 0 702
ENST00000553523 MED6-011 retained_intron Homo_sapiens 0 364
ENST00000553611 MED6-006 retained_intron Homo_sapiens 0 595
ENST00000554870 MED6-003 retained_intron Homo_sapiens 0 534
ENST00000554963 MED6-012 protein_coding Homo_sapiens 0 1026
ENST00000555296 MED6-010 retained_intron Homo_sapiens 0 335
ENST00000556044 MED6-007 processed_transcript Homo_sapiens 0 806
ENST00000556423 MED6-008 retained_intron Homo_sapiens 0 414
ENST00000556495 MED6-005 retained_intron Homo_sapiens 0 702
ENST00000615788 MED6-201 protein_coding Homo_sapiens 0 1038

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