C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161240 Galnt4-001 ENSMUSG00000090035 10090 + 10:99108159-99113247 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161240
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161240 2.079±0.85 0.841±0.32 2.916±0.54 0.389±0.13 1.142±0.39 15.304±0.42 0.463±0.09 1.136±0.12 0.869±0.15 3.490±0.13 0.506±0.08 1.290±0.60 1.027±0.26 0.368±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EZ CIL_0002EZ_0002 CGP 10:99107036-99198074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398055 C12orf66-001 protein_coding Homo_sapiens 0.00008 55
ENST00000529983 GALNT4-001 protein_coding Homo_sapiens 0 2002
ENST00000547474 POC1B-GALNT4-002 protein_coding Homo_sapiens 0 911
ENST00000548729 POC1B-GALNT4-001 protein_coding Homo_sapiens 0 1792

Loading