C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POC1B-GALNT4 readthrough
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548729 POC1B-GALNT4-001 ENSG00000259075 9606 - 12:89519408-89526198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLungMuscleOvaryPlacentaENST00000548729
Transcript ID Heart Kidney Lung Muscle Ovary Placenta
ENST00000548729 0.265±0.00 0.788±0.09 1.766±0.00 0.161±0.00 2.936±0.00 0.545±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000213 CIL_000213_0002 CGP 12:89347232-89526024
CIL_0002EZ CIL_0002EZ_0001 CGP 12:89419718-89526262

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161240 Galnt4-001 protein_coding Mus_musculus 0 1792
ENSMUST00000020113 Poc1b-001 protein_coding Mus_musculus 3e-40 172
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000006 62

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