C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Hermansky-Pudlak syndrome 1 homolog (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161252 Hps1-006 ENSMUSG00000025188 10090 - 19:42755583-42757829 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000161252
Transcript ID Adrenal
ENSMUST00000161252 67.707±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054X CIL_00054X_0002 CGP 19:42725858-42779978
CIL_00054W CIL_00054W_0002 CGP 19:42755105-43388311

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325103 HPS1-009 protein_coding Homo_sapiens 0.00000003 66
ENST00000361490 HPS1-011 protein_coding Homo_sapiens 0.00000003 66
ENST00000462743 HPS1-005 processed_transcript Homo_sapiens 0.000000003 66
ENST00000467246 HPS1-012 processed_transcript Homo_sapiens 0.00000002 66
ENST00000613394 HPS1-201 protein_coding Homo_sapiens 0.00000003 66

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