C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCHC-type and RNA binding motif 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161409 Zcrb1-003 ENSMUSG00000022635 10090 - 15:93387801-93398334 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000161409
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000161409 16.191±3.39 8.052±5.62 5.856±2.05 12.214±2.98 13.314±3.66 2.220±0.56 9.731±3.84 3.852±1.40 14.938±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000468 CIL_000468_0002 CGP 15:93284278-93398334

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266529 ZCRB1-001 protein_coding Homo_sapiens 0 388
ENST00000552235 ZCRB1-002 protein_coding Homo_sapiens 0 388
ENST00000552673 ZCRB1-005 protein_coding Homo_sapiens 0 388

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